Everything comes from the stereo (LF,RF,RR, RL) in low level and goes to the amp, the amp then takes this and sends the bass and the highs to the proper speakers.
Im not sure of a way to get around this, but im thinking maybe specialized places like stereo shops may have an adapter to combine the two out puts from the amp into one...I will look on monday for some diagrams and info on the operation of this system so you can get an idea of how it works and such.