if you matched every single wire and put a two position switch with a bank of relays in there you could easily swap between the two and the car would never be the wiser.
however, it's sounds like a super pain in the ass.
Not really, just run the wires to the pcm for the engine control side and leave the rest with the original PCM. Just a CEL is permanent.
But a Megasquirt PCM would be easier to hook up I'd bet.
Cry havoc and let slip the dogs of war.
2004 Saab 9-5 Aero - WAHSAABI - Way too much power/Koni FSD & Hirsch Springs/Big Sways - DD/AutoX'r
2007 Ford F-150 Lariat - 5.4L V8 - Bill secretly likes it
2015 Mitsubishi Outlander Sport SE - Wifey Mobile