Well... We finally got the wheels to turn! Chris (my roommate) and I had to completely remove the gearbox coupler and modify it. I wish I had taken pictures, but we both were so frustrated that neither one of us thought of it. 8 hours or screwing around under the car just to figure out that the task at hand could have been accomplished in less than half an hour.
I have noticed a slight pop under initial acceleration. I'm going to guess that it's one of my motor mounts not being tight enough, because I went back and tightened all of the cradle bolts and strut tower bolts. That leaves me with motor mounts. If I get a chance tomorrow between class and work, I"ll see what I can find. Time to update the sig...