Um, yeah, a canned tune cant be run with a intercooler.
You need a full on custom tune with a wideband.
Headers, Intake, 605's, 3.6 pulley and a overkill tune will do fine.
Anything past a 3.6 and you dont want to run a canned tune, it only good for so much.
(I say 3.6 because the Gen V is better than a Gen 3)
You got alot of reading to do, to know how to mod these cars.